Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm8825-201ENSMUST00000182565 998 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm4518-201ENSMUST00000182638 718 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm7063-201ENSMUST00000186840 981 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm10576-201ENSMUST00000191927 825 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf43Q5NCP0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Gm37153-201ENSMUST00000193637 231 ntBASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf43Q5NCP0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf43Q5NCP0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf43Q5NCP0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms