Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.65■□□□□ 0.74
Shank3Q4ACU6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shank3Q4ACU6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shank3Q4ACU6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shank3Q4ACU6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Gm5779-201ENSMUST00000218467 910 ntBASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shank3Q4ACU6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm8318-201ENSMUST00000182954 872 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm27618-201ENSMUST00000183671 60 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm10154-201ENSMUST00000084445 354 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm27437-201ENSMUST00000183429 107 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Mir6977-201ENSMUST00000184960 64 ntBASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Shank3Q4ACU6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Gm18057-201ENSMUST00000208220 503 ntBASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shank3Q4ACU6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Gm29541-201ENSMUST00000191351 678 ntBASIC19.6■□□□□ 0.73
Shank3Q4ACU6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shank3Q4ACU6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Gm6973-201ENSMUST00000117080 721 ntBASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shank3Q4ACU6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms