Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Gm2651-201ENSMUST00000203560 838 ntBASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc4Q3TCX3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Gm18206-201ENSMUST00000207027 926 ntBASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc4Q3TCX3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.09■□□□□ 0.01
Khdc4Q3TCX3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.08■□□□□ 0.01
Khdc4Q3TCX3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc4Q3TCX3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc4Q3TCX3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.08■□□□□ 0.01
Khdc4Q3TCX3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc4Q3TCX3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc4Q3TCX3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.08■□□□□ 0
Khdc4Q3TCX3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms