Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cul4aQ3TCH7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.71■□□□□ 0.26
Cul4aQ3TCH7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cul4aQ3TCH7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 BC037039-201ENSMUST00000192003 2205 ntBASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cul4aQ3TCH7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cul4aQ3TCH7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cul4aQ3TCH7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Gm6257-201ENSMUST00000163864 910 ntBASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cul4aQ3TCH7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cul4aQ3TCH7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms