Protein–RNA interactions for Protein: Q3TC46

Patl1, Protein PAT1 homolog 1, mousemouse

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Patl1Q3TC46 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.16■□□□□ 0.02
Patl1Q3TC46 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Patl1Q3TC46 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.15■□□□□ 0.02
Patl1Q3TC46 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Gm29257-201ENSMUST00000186115 639 ntBASIC15.15■□□□□ 0.02
Patl1Q3TC46 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Patl1Q3TC46 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Patl1Q3TC46 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Gm27000-201ENSMUST00000182943 842 ntBASIC15.14■□□□□ 0.01
Patl1Q3TC46 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.14■□□□□ 0.01
Patl1Q3TC46 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Patl1Q3TC46 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Gm37292-201ENSMUST00000192062 758 ntBASIC15.13■□□□□ 0.01
Patl1Q3TC46 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Patl1Q3TC46 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Patl1Q3TC46 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms