Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna5Q2MKA5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna5Q2MKA5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna5Q2MKA5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna5Q2MKA5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna5Q2MKA5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna5Q2MKA5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Gm6257-201ENSMUST00000163864 910 ntBASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna5Q2MKA5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Gm18889-201ENSMUST00000174284 929 ntBASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Thap2-203ENSMUST00000218989 527 ntBASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Gm18246-201ENSMUST00000221023 728 ntBASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chrna5Q2MKA5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Gm9385-201ENSMUST00000117563 472 ntBASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.81■□□□□ 0.6
Chrna5Q2MKA5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna5Q2MKA5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Gm43125-201ENSMUST00000201724 730 ntBASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna5Q2MKA5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms