Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox4Q06831 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox4Q06831 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox4Q06831 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.61■□□□□ 0.09
Sox4Q06831 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox4Q06831 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox4Q06831 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.6■□□□□ 0.09
Sox4Q06831 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.6■□□□□ 0.09
Sox4Q06831 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Sox4Q06831 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.6■□□□□ 0.09
Sox4Q06831 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox4Q06831 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.6■□□□□ 0.09
Sox4Q06831 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox4Q06831 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Sox4Q06831 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox4Q06831 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sox4Q06831 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.6■□□□□ 0.09
Sox4Q06831 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Sox4Q06831 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox4Q06831 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sox4Q06831 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Sox4Q06831 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm8825-201ENSMUST00000182565 998 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm4518-201ENSMUST00000182638 718 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Mir8098-201ENSMUST00000184011 137 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm28659-201ENSMUST00000188013 759 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.59■□□□□ 0.09
Sox4Q06831 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox4Q06831 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sox4Q06831 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox4Q06831 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox4Q06831 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.59■□□□□ 0.09
Sox4Q06831 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Sox4Q06831 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox4Q06831 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Gm8097-201ENSMUST00000117903 829 ntBASIC15.58■□□□□ 0.08
Sox4Q06831 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.58■□□□□ 0.08
Sox4Q06831 Gm13884-201ENSMUST00000118103 829 ntBASIC15.58■□□□□ 0.08
Sox4Q06831 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Sox4Q06831 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Sox4Q06831 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Gm6296-201ENSMUST00000222599 943 ntBASIC15.58■□□□□ 0.08
Sox4Q06831 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.58■□□□□ 0.08
Sox4Q06831 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Sox4Q06831 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox4Q06831 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms