Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.53■□□□□ 0.08
Col9a1Q05722 Mir1982-201ENSMUST00000157368 74 ntBASIC15.53■□□□□ 0.08
Col9a1Q05722 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.53■□□□□ 0.08
Col9a1Q05722 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.53■□□□□ 0.08
Col9a1Q05722 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC15.53■□□□□ 0.08
Col9a1Q05722 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.53■□□□□ 0.08
Col9a1Q05722 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col9a1Q05722 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.53■□□□□ 0.08
Col9a1Q05722 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col9a1Q05722 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Col9a1Q05722 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col9a1Q05722 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col9a1Q05722 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.52■□□□□ 0.08
Col9a1Q05722 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm15198-201ENSMUST00000117283 177 ntBASIC15.52■□□□□ 0.08
Col9a1Q05722 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.52■□□□□ 0.08
Col9a1Q05722 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Gm27892-201ENSMUST00000185017 106 ntBASIC15.52■□□□□ 0.08
Col9a1Q05722 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 AC106830.1-201ENSMUST00000228032 1003 ntBASIC15.52■□□□□ 0.08
Col9a1Q05722 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col9a1Q05722 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Col9a1Q05722 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col9a1Q05722 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col9a1Q05722 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col9a1Q05722 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col9a1Q05722 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col9a1Q05722 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Gm36991-201ENSMUST00000191800 648 ntBASIC15.51■□□□□ 0.07
Col9a1Q05722 Gm37466-201ENSMUST00000195692 652 ntBASIC15.51■□□□□ 0.07
Col9a1Q05722 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.51■□□□□ 0.07
Col9a1Q05722 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.51■□□□□ 0.07
Col9a1Q05722 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.51■□□□□ 0.07
Col9a1Q05722 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.51■□□□□ 0.07
Col9a1Q05722 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col9a1Q05722 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col9a1Q05722 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Gm18753-201ENSMUST00000201000 566 ntBASIC15.5■□□□□ 0.07
Col9a1Q05722 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.5■□□□□ 0.07
Col9a1Q05722 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col9a1Q05722 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col9a1Q05722 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.49■□□□□ 0.07
Col9a1Q05722 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col9a1Q05722 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col9a1Q05722 Gm7430-201ENSMUST00000193824 1144 ntBASIC15.49■□□□□ 0.07
Col9a1Q05722 Gm9063-201ENSMUST00000223299 582 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms