Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Thumpd3P97770 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Thumpd3P97770 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thumpd3P97770 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thumpd3P97770 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Thumpd3P97770 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Thumpd3P97770 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Thumpd3P97770 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thumpd3P97770 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Thumpd3P97770 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Thumpd3P97770 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.2■□□□□ 0.18
Thumpd3P97770 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Thumpd3P97770 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Thumpd3P97770 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Thumpd3P97770 Gm7284-201ENSMUST00000131667 944 ntBASIC16.2■□□□□ 0.18
Thumpd3P97770 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.2■□□□□ 0.18
Thumpd3P97770 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Thumpd3P97770 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.19■□□□□ 0.18
Thumpd3P97770 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Phf7-203ENSMUST00000226565 1971 ntBASIC16.19■□□□□ 0.18
Thumpd3P97770 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.19■□□□□ 0.18
Thumpd3P97770 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.19■□□□□ 0.18
Thumpd3P97770 Gm5587-201ENSMUST00000206270 674 ntBASIC16.19■□□□□ 0.18
Thumpd3P97770 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Thumpd3P97770 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Thumpd3P97770 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Thumpd3P97770 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Thumpd3P97770 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms