Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pdlim4P70271 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pdlim4P70271 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.24□□□□□ -0.29
Pdlim4P70271 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.23□□□□□ -0.29
Pdlim4P70271 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.23□□□□□ -0.29
Pdlim4P70271 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.23□□□□□ -0.29
Pdlim4P70271 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pdlim4P70271 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pdlim4P70271 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.22□□□□□ -0.29
Pdlim4P70271 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.22□□□□□ -0.29
Pdlim4P70271 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.22□□□□□ -0.29
Pdlim4P70271 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pdlim4P70271 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pdlim4P70271 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pdlim4P70271 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.21□□□□□ -0.29
Pdlim4P70271 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms