Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rpl39P62892 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.37□□□□□ -0.59
Rpl39P62892 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rpl39P62892 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Gm7791-201ENSMUST00000219066 539 ntBASIC11.37□□□□□ -0.59
Rpl39P62892 Gm20049-201ENSMUST00000219950 730 ntBASIC11.37□□□□□ -0.59
Rpl39P62892 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rpl39P62892 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.37□□□□□ -0.59
Rpl39P62892 Phf7-203ENSMUST00000226565 1971 ntBASIC11.37□□□□□ -0.59
Rpl39P62892 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rpl39P62892 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl39P62892 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpl39P62892 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.36□□□□□ -0.59
Rpl39P62892 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.36□□□□□ -0.59
Rpl39P62892 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.36□□□□□ -0.59
Rpl39P62892 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rpl39P62892 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Rpl39P62892 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Rpl39P62892 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.36□□□□□ -0.59
Rpl39P62892 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl39P62892 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.36□□□□□ -0.59
Rpl39P62892 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl39P62892 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rpl39P62892 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.35□□□□□ -0.59
Rpl39P62892 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.35□□□□□ -0.59
Rpl39P62892 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Rpl39P62892 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rpl39P62892 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl39P62892 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms