Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.82□□□□□ -0.36
Lmo4P61969 Gm43575-201ENSMUST00000196420 516 ntBASIC12.82□□□□□ -0.36
Lmo4P61969 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.82□□□□□ -0.36
Lmo4P61969 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Gm10175-201ENSMUST00000086013 645 ntBASIC12.82□□□□□ -0.36
Lmo4P61969 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lmo4P61969 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lmo4P61969 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.82□□□□□ -0.36
Lmo4P61969 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lmo4P61969 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
Lmo4P61969 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Lmo4P61969 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Haglr-201ENSMUST00000100000 2085 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.81□□□□□ -0.36
Lmo4P61969 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.81□□□□□ -0.36
Lmo4P61969 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm18489-201ENSMUST00000172565 551 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm27397-201ENSMUST00000184997 107 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm9682-201ENSMUST00000197505 556 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.81□□□□□ -0.36
Lmo4P61969 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lmo4P61969 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.81□□□□□ -0.36
Lmo4P61969 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.81□□□□□ -0.36
Lmo4P61969 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lmo4P61969 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Lmo4P61969 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lmo4P61969 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lmo4P61969 Gm25911-201ENSMUST00000157621 56 ntBASIC12.8□□□□□ -0.36
Lmo4P61969 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.8□□□□□ -0.36
Lmo4P61969 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.8□□□□□ -0.36
Lmo4P61969 Gm7787-201ENSMUST00000216858 688 ntBASIC12.8□□□□□ -0.36
Lmo4P61969 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.8□□□□□ -0.36
Lmo4P61969 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Lmo4P61969 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lmo4P61969 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lmo4P61969 Gm23935-201ENSMUST00000102303 57 ntBASIC12.79□□□□□ -0.36
Lmo4P61969 Gm24270-201ENSMUST00000102326 57 ntBASIC12.79□□□□□ -0.36
Lmo4P61969 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Lmo4P61969 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.79□□□□□ -0.36
Lmo4P61969 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.79□□□□□ -0.36
Lmo4P61969 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lmo4P61969 Gm24245-201ENSMUST00000157318 57 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms