Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.96■□□□□ 0.47
Rrp1P56183 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.96■□□□□ 0.47
Rrp1P56183 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Rrp1P56183 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.96■□□□□ 0.47
Rrp1P56183 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp1P56183 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rrp1P56183 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rrp1P56183 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rrp1P56183 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Rrp1P56183 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.95■□□□□ 0.46
Rrp1P56183 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rrp1P56183 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.95■□□□□ 0.46
Rrp1P56183 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rrp1P56183 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rrp1P56183 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp1P56183 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Rrp1P56183 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rrp1P56183 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Rrp1P56183 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rrp1P56183 Mir5130-201ENSMUST00000175160 84 ntBASIC17.94■□□□□ 0.46
Rrp1P56183 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rrp1P56183 Gm9987-201ENSMUST00000069768 567 ntBASIC17.94■□□□□ 0.46
Rrp1P56183 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rrp1P56183 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.94■□□□□ 0.46
Rrp1P56183 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rrp1P56183 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp1P56183 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.93■□□□□ 0.46
Rrp1P56183 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rrp1P56183 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.93■□□□□ 0.46
Rrp1P56183 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp1P56183 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp1P56183 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp1P56183 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp1P56183 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp1P56183 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.92■□□□□ 0.46
Rrp1P56183 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Rrp1P56183 Gm6433-201ENSMUST00000118634 875 ntBASIC17.92■□□□□ 0.46
Rrp1P56183 Gm37722-201ENSMUST00000193757 208 ntBASIC17.92■□□□□ 0.46
Rrp1P56183 Gm45058-201ENSMUST00000205810 766 ntBASIC17.92■□□□□ 0.46
Rrp1P56183 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms