Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.72■□□□□ 0.43
Brca1P48754 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.72■□□□□ 0.43
Brca1P48754 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brca1P48754 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Brca1P48754 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.71■□□□□ 0.43
Brca1P48754 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Brca1P48754 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Brca1P48754 Gm13823-201ENSMUST00000119930 345 ntBASIC17.71■□□□□ 0.43
Brca1P48754 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Brca1P48754 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Brca1P48754 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.71■□□□□ 0.43
Brca1P48754 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.71■□□□□ 0.43
Brca1P48754 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Brca1P48754 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Brca1P48754 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Brca1P48754 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Brca1P48754 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Brca1P48754 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Brca1P48754 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.71■□□□□ 0.43
Brca1P48754 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Brca1P48754 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Brca1P48754 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Brca1P48754 Gm14722-201ENSMUST00000118943 689 ntBASIC17.7■□□□□ 0.42
Brca1P48754 Gm15693-201ENSMUST00000120470 637 ntBASIC17.7■□□□□ 0.42
Brca1P48754 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.7■□□□□ 0.42
Brca1P48754 Gm8318-201ENSMUST00000182954 872 ntBASIC17.7■□□□□ 0.42
Brca1P48754 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Gm7653-201ENSMUST00000214567 508 ntBASIC17.7■□□□□ 0.42
Brca1P48754 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.7■□□□□ 0.42
Brca1P48754 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Brca1P48754 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.7■□□□□ 0.42
Brca1P48754 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Brca1P48754 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.7■□□□□ 0.42
Brca1P48754 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Brca1P48754 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Brca1P48754 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Brca1P48754 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Brca1P48754 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Brca1P48754 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.69■□□□□ 0.42
Brca1P48754 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.69■□□□□ 0.42
Brca1P48754 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.69■□□□□ 0.42
Brca1P48754 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.69■□□□□ 0.42
Brca1P48754 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Brca1P48754 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.69■□□□□ 0.42
Brca1P48754 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Brca1P48754 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.68■□□□□ 0.42
Brca1P48754 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.68■□□□□ 0.42
Brca1P48754 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Brca1P48754 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Brca1P48754 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.68■□□□□ 0.42
Brca1P48754 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Brca1P48754 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Brca1P48754 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms