Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Gm18032-201ENSMUST00000222541 538 ntBASIC14.97□□□□□ -0.01
Sox6P40645 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.97□□□□□ -0.01
Sox6P40645 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.97□□□□□ -0.01
Sox6P40645 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox6P40645 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox6P40645 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox6P40645 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sox6P40645 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Gm26039-201ENSMUST00000158152 144 ntBASIC14.96□□□□□ -0.01
Sox6P40645 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sox6P40645 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.96□□□□□ -0.01
Sox6P40645 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.96□□□□□ -0.01
Sox6P40645 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sox6P40645 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sox6P40645 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox6P40645 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Sox6P40645 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox6P40645 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.96□□□□□ -0.02
Sox6P40645 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox6P40645 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox6P40645 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox6P40645 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox6P40645 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox6P40645 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.96□□□□□ -0.02
Sox6P40645 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.96□□□□□ -0.02
Sox6P40645 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sox6P40645 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Gm21559-201ENSMUST00000220638 855 ntBASIC14.95□□□□□ -0.02
Sox6P40645 Gm8587-201ENSMUST00000076538 843 ntBASIC14.95□□□□□ -0.02
Sox6P40645 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Sox6P40645 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Sox6P40645 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox6P40645 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox6P40645 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox6P40645 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox6P40645 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox6P40645 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms