Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Gm12085-201ENSMUST00000119263 940 ntBASIC12.61□□□□□ -0.39
Rom1P32958 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.61□□□□□ -0.39
Rom1P32958 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Gm18284-201ENSMUST00000172604 624 ntBASIC12.61□□□□□ -0.39
Rom1P32958 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.61□□□□□ -0.39
Rom1P32958 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rom1P32958 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rom1P32958 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.61□□□□□ -0.39
Rom1P32958 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rom1P32958 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.6□□□□□ -0.39
Rom1P32958 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Phf7-203ENSMUST00000226565 1971 ntBASIC12.6□□□□□ -0.39
Rom1P32958 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rom1P32958 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.6□□□□□ -0.39
Rom1P32958 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rom1P32958 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rom1P32958 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rom1P32958 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rom1P32958 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.59□□□□□ -0.39
Rom1P32958 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.59□□□□□ -0.39
Rom1P32958 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.59□□□□□ -0.39
Rom1P32958 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rom1P32958 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Rom1P32958 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.59□□□□□ -0.39
Rom1P32958 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rom1P32958 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.59□□□□□ -0.39
Rom1P32958 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Gm7791-201ENSMUST00000219066 539 ntBASIC12.59□□□□□ -0.39
Rom1P32958 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rom1P32958 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rom1P32958 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.59□□□□□ -0.39
Rom1P32958 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rom1P32958 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.59□□□□□ -0.39
Rom1P32958 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rom1P32958 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rom1P32958 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rom1P32958 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Rom1P32958 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rom1P32958 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rom1P32958 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rom1P32958 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.58□□□□□ -0.4
Rom1P32958 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.58□□□□□ -0.4
Rom1P32958 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rom1P32958 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms