Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.06□□□□□ -0.16
Cd28P31041 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.06□□□□□ -0.16
Cd28P31041 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cd28P31041 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cd28P31041 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.05□□□□□ -0.16
Cd28P31041 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.05□□□□□ -0.16
Cd28P31041 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.05□□□□□ -0.16
Cd28P31041 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.05□□□□□ -0.16
Cd28P31041 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cd28P31041 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cd28P31041 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd28P31041 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Gm5643-201ENSMUST00000117081 966 ntBASIC14.04□□□□□ -0.16
Cd28P31041 Gm12441-201ENSMUST00000121806 588 ntBASIC14.04□□□□□ -0.16
Cd28P31041 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.04□□□□□ -0.16
Cd28P31041 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.04□□□□□ -0.16
Cd28P31041 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.04□□□□□ -0.16
Cd28P31041 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cd28P31041 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cd28P31041 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd28P31041 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cd28P31041 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cd28P31041 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Cd28P31041 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cd28P31041 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cd28P31041 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.03□□□□□ -0.16
Cd28P31041 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cd28P31041 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.03□□□□□ -0.16
Cd28P31041 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.03□□□□□ -0.16
Cd28P31041 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cd28P31041 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cd28P31041 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cd28P31041 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cd28P31041 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms