Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Vcam1P29533 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcam1P29533 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcam1P29533 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.22■□□□□ 0.51
Vcam1P29533 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcam1P29533 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.22■□□□□ 0.51
Vcam1P29533 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcam1P29533 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vcam1P29533 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vcam1P29533 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vcam1P29533 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.21■□□□□ 0.51
Vcam1P29533 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.21■□□□□ 0.51
Vcam1P29533 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.21■□□□□ 0.51
Vcam1P29533 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vcam1P29533 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vcam1P29533 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.21■□□□□ 0.51
Vcam1P29533 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Vcam1P29533 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.2■□□□□ 0.5
Vcam1P29533 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.2■□□□□ 0.5
Vcam1P29533 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.2■□□□□ 0.5
Vcam1P29533 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vcam1P29533 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.2■□□□□ 0.5
Vcam1P29533 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vcam1P29533 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.2■□□□□ 0.5
Vcam1P29533 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.2■□□□□ 0.5
Vcam1P29533 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vcam1P29533 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Vcam1P29533 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.2■□□□□ 0.5
Vcam1P29533 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.2■□□□□ 0.5
Vcam1P29533 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vcam1P29533 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vcam1P29533 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.19■□□□□ 0.5
Vcam1P29533 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.19■□□□□ 0.5
Vcam1P29533 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vcam1P29533 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Vcam1P29533 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.19■□□□□ 0.5
Vcam1P29533 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Vcam1P29533 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Vcam1P29533 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vcam1P29533 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vcam1P29533 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vcam1P29533 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Vcam1P29533 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Vcam1P29533 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vcam1P29533 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vcam1P29533 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms