Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tnfrsf1bP25119 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Tnfrsf1bP25119 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gm7153-201ENSMUST00000117092 455 ntBASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gm43347-201ENSMUST00000200226 580 ntBASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gm7506-201ENSMUST00000207758 815 ntBASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Tnfrsf1bP25119 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Gm9172-201ENSMUST00000212092 954 ntBASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Birc2-201ENSMUST00000054878 378 ntBASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfrsf1bP25119 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tnfrsf1bP25119 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms