Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Prim1P20664 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Gm45167-201ENSMUST00000208007 322 ntBASIC20.16■□□□□ 0.82
Prim1P20664 AC073947.1-201ENSMUST00000216991 649 ntBASIC20.16■□□□□ 0.82
Prim1P20664 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prim1P20664 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prim1P20664 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Prim1P20664 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Prim1P20664 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Gm15467-201ENSMUST00000120582 445 ntBASIC20.15■□□□□ 0.82
Prim1P20664 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Prim1P20664 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prim1P20664 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prim1P20664 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.15■□□□□ 0.82
Prim1P20664 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.15■□□□□ 0.82
Prim1P20664 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prim1P20664 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Prim1P20664 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Prim1P20664 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Prim1P20664 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.14■□□□□ 0.81
Prim1P20664 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Gm14494-201ENSMUST00000118786 435 ntBASIC20.14■□□□□ 0.81
Prim1P20664 Gm9727-201ENSMUST00000161387 555 ntBASIC20.14■□□□□ 0.81
Prim1P20664 Gm4899-201ENSMUST00000178708 719 ntBASIC20.14■□□□□ 0.81
Prim1P20664 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Prim1P20664 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.14■□□□□ 0.81
Prim1P20664 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prim1P20664 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.13■□□□□ 0.81
Prim1P20664 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.13■□□□□ 0.81
Prim1P20664 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Prim1P20664 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.13■□□□□ 0.81
Prim1P20664 Gm11764-201ENSMUST00000120221 623 ntBASIC20.13■□□□□ 0.81
Prim1P20664 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.13■□□□□ 0.81
Prim1P20664 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.13■□□□□ 0.81
Prim1P20664 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prim1P20664 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.12■□□□□ 0.81
Prim1P20664 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Gm11434-201ENSMUST00000122379 629 ntBASIC20.12■□□□□ 0.81
Prim1P20664 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.12■□□□□ 0.81
Prim1P20664 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.12■□□□□ 0.81
Prim1P20664 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.12■□□□□ 0.81
Prim1P20664 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.12■□□□□ 0.81
Prim1P20664 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prim1P20664 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prim1P20664 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms