Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hcn3O88705 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.26■□□□□ 0.03
Hcn3O88705 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcn3O88705 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.25■□□□□ 0.03
Hcn3O88705 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Hcn3O88705 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hcn3O88705 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Gm7638-201ENSMUST00000121348 967 ntBASIC15.25■□□□□ 0.03
Hcn3O88705 Gm18958-201ENSMUST00000174258 762 ntBASIC15.25■□□□□ 0.03
Hcn3O88705 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.25■□□□□ 0.03
Hcn3O88705 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.25■□□□□ 0.03
Hcn3O88705 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.25■□□□□ 0.03
Hcn3O88705 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcn3O88705 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.24■□□□□ 0.03
Hcn3O88705 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.24■□□□□ 0.03
Hcn3O88705 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.24■□□□□ 0.03
Hcn3O88705 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.24■□□□□ 0.03
Hcn3O88705 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.24■□□□□ 0.03
Hcn3O88705 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Hcn3O88705 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.24■□□□□ 0.03
Hcn3O88705 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hcn3O88705 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.24■□□□□ 0.03
Hcn3O88705 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.24■□□□□ 0.03
Hcn3O88705 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hcn3O88705 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hcn3O88705 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcn3O88705 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Hcn3O88705 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hcn3O88705 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.23■□□□□ 0.03
Hcn3O88705 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.23■□□□□ 0.03
Hcn3O88705 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.23■□□□□ 0.03
Hcn3O88705 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.23■□□□□ 0.03
Hcn3O88705 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hcn3O88705 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcn3O88705 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms