Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdlim1O70400 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Pdlim1O70400 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.68■□□□□ 0.1
Pdlim1O70400 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Gm4459-201ENSMUST00000118750 468 ntBASIC15.68■□□□□ 0.1
Pdlim1O70400 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.68■□□□□ 0.1
Pdlim1O70400 Gm43347-201ENSMUST00000200226 580 ntBASIC15.68■□□□□ 0.1
Pdlim1O70400 Gm7506-201ENSMUST00000207758 815 ntBASIC15.68■□□□□ 0.1
Pdlim1O70400 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pdlim1O70400 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.68■□□□□ 0.1
Pdlim1O70400 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Dancr-204ENSMUST00000132389 2347 ntBASIC15.67■□□□□ 0.1
Pdlim1O70400 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Gm24589-201ENSMUST00000116692 94 ntBASIC15.67■□□□□ 0.1
Pdlim1O70400 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.67■□□□□ 0.1
Pdlim1O70400 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pdlim1O70400 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pdlim1O70400 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim1O70400 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.66■□□□□ 0.1
Pdlim1O70400 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.66■□□□□ 0.1
Pdlim1O70400 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.66■□□□□ 0.1
Pdlim1O70400 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.66■□□□□ 0.1
Pdlim1O70400 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.66■□□□□ 0.1
Pdlim1O70400 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pdlim1O70400 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim1O70400 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim1O70400 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pdlim1O70400 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Pdlim1O70400 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.65■□□□□ 0.1
Pdlim1O70400 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.65■□□□□ 0.1
Pdlim1O70400 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.65■□□□□ 0.1
Pdlim1O70400 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.65■□□□□ 0.1
Pdlim1O70400 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim1O70400 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim1O70400 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim1O70400 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Pdlim1O70400 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim1O70400 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms