Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.07■□□□□ 0
Rdh5O55240 Gm18669-201ENSMUST00000216049 778 ntBASIC15.07■□□□□ 0
Rdh5O55240 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rdh5O55240 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rdh5O55240 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rdh5O55240 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rdh5O55240 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh5O55240 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rdh5O55240 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rdh5O55240 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.06■□□□□ 0
Rdh5O55240 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.06■□□□□ 0
Rdh5O55240 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rdh5O55240 Gm27742-201ENSMUST00000184667 60 ntBASIC15.06■□□□□ 0
Rdh5O55240 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rdh5O55240 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.06■□□□□ 0
Rdh5O55240 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Rdh5O55240 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh5O55240 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.05■□□□□ 0
Rdh5O55240 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh5O55240 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rdh5O55240 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh5O55240 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh5O55240 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh5O55240 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh5O55240 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Rdh5O55240 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.05■□□□□ -0
Rdh5O55240 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rdh5O55240 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh5O55240 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.04■□□□□ -0
Rdh5O55240 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.04■□□□□ -0
Rdh5O55240 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rdh5O55240 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rdh5O55240 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rdh5O55240 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rdh5O55240 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.04■□□□□ -0
Rdh5O55240 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Mir6404-201ENSMUST00000183699 94 ntBASIC15.04■□□□□ -0
Rdh5O55240 Gm28033-201ENSMUST00000184224 96 ntBASIC15.04■□□□□ -0
Rdh5O55240 Gm17971-201ENSMUST00000190239 806 ntBASIC15.04■□□□□ -0
Rdh5O55240 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.04■□□□□ -0
Rdh5O55240 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rdh5O55240 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rdh5O55240 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh5O55240 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rdh5O55240 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.03■□□□□ -0
Rdh5O55240 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rdh5O55240 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rdh5O55240 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rdh5O55240 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh5O55240 Gm13312-201ENSMUST00000119631 718 ntBASIC15.03■□□□□ -0
Rdh5O55240 Olfr129-201ENSMUST00000122318 993 ntBASIC15.03■□□□□ -0
Rdh5O55240 Mir3081-201ENSMUST00000175305 84 ntBASIC15.03■□□□□ -0
Rdh5O55240 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms