Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SncaO55042 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaO55042 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.19□□□□□ -0.3
SncaO55042 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.18□□□□□ -0.3
SncaO55042 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.18□□□□□ -0.3
SncaO55042 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.18□□□□□ -0.3
SncaO55042 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SncaO55042 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaO55042 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SncaO55042 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaO55042 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.17□□□□□ -0.3
SncaO55042 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaO55042 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SncaO55042 Gm36967-201ENSMUST00000193814 266 ntBASIC13.17□□□□□ -0.3
SncaO55042 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaO55042 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.17□□□□□ -0.3
SncaO55042 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaO55042 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SncaO55042 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SncaO55042 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Prob1-201ENSMUST00000097619 3021 ntBASIC13.16□□□□□ -0.3
SncaO55042 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.16□□□□□ -0.3
SncaO55042 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SncaO55042 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
SncaO55042 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
SncaO55042 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SncaO55042 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SncaO55042 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaO55042 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.15□□□□□ -0.3
SncaO55042 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SncaO55042 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SncaO55042 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms