Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Dkk1O54908 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.09□□□□□ -0.15
Dkk1O54908 Gm36967-201ENSMUST00000193814 266 ntBASIC14.09□□□□□ -0.15
Dkk1O54908 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 AC147101.1-201ENSMUST00000217964 312 ntBASIC14.09□□□□□ -0.15
Dkk1O54908 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Dkk1O54908 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Dkk1O54908 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Dkk1O54908 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Dkk1O54908 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.08□□□□□ -0.16
Dkk1O54908 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Dkk1O54908 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.08□□□□□ -0.16
Dkk1O54908 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.08□□□□□ -0.16
Dkk1O54908 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.08□□□□□ -0.16
Dkk1O54908 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC14.08□□□□□ -0.16
Dkk1O54908 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC14.08□□□□□ -0.16
Dkk1O54908 Gm38247-201ENSMUST00000194675 433 ntBASIC14.08□□□□□ -0.16
Dkk1O54908 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC14.08□□□□□ -0.16
Dkk1O54908 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Dkk1O54908 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Dkk1O54908 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Dkk1O54908 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Dkk1O54908 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.07□□□□□ -0.16
Dkk1O54908 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Dkk1O54908 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Dkk1O54908 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Dkk1O54908 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Dkk1O54908 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Dkk1O54908 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Dkk1O54908 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Dkk1O54908 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Gm15794-201ENSMUST00000120182 631 ntBASIC14.06□□□□□ -0.16
Dkk1O54908 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.06□□□□□ -0.16
Dkk1O54908 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Dkk1O54908 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC14.06□□□□□ -0.16
Dkk1O54908 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Dkk1O54908 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms