Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lsm2O35900 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.19□□□□□ -0.14
Lsm2O35900 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.19□□□□□ -0.14
Lsm2O35900 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lsm2O35900 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.18□□□□□ -0.14
Lsm2O35900 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.18□□□□□ -0.14
Lsm2O35900 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.18□□□□□ -0.14
Lsm2O35900 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Lsm2O35900 Gm12527-201ENSMUST00000117967 564 ntBASIC14.18□□□□□ -0.14
Lsm2O35900 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Lsm2O35900 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.18□□□□□ -0.14
Lsm2O35900 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm2O35900 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm2O35900 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Lsm2O35900 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Lsm2O35900 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm2O35900 Gm12441-201ENSMUST00000121806 588 ntBASIC14.17□□□□□ -0.14
Lsm2O35900 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.17□□□□□ -0.14
Lsm2O35900 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.17□□□□□ -0.14
Lsm2O35900 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.17□□□□□ -0.14
Lsm2O35900 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm2O35900 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.16□□□□□ -0.14
Lsm2O35900 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lsm2O35900 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lsm2O35900 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Lsm2O35900 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.16□□□□□ -0.14
Lsm2O35900 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm2O35900 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms