Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.38■□□□□ 0.37
Sptlc1O35704 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.38■□□□□ 0.37
Sptlc1O35704 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Sptlc1O35704 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.38■□□□□ 0.37
Sptlc1O35704 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sptlc1O35704 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.37■□□□□ 0.37
Sptlc1O35704 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.37■□□□□ 0.37
Sptlc1O35704 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.37■□□□□ 0.37
Sptlc1O35704 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sptlc1O35704 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.36■□□□□ 0.37
Sptlc1O35704 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.36■□□□□ 0.37
Sptlc1O35704 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Sptlc1O35704 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sptlc1O35704 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Gm6736-201ENSMUST00000166583 948 ntBASIC17.36■□□□□ 0.37
Sptlc1O35704 Gm45878-201ENSMUST00000211839 241 ntBASIC17.36■□□□□ 0.37
Sptlc1O35704 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Gm10175-201ENSMUST00000086013 645 ntBASIC17.36■□□□□ 0.37
Sptlc1O35704 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sptlc1O35704 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sptlc1O35704 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm23935-201ENSMUST00000102303 57 ntBASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm24270-201ENSMUST00000102326 57 ntBASIC17.35■□□□□ 0.37
Sptlc1O35704 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.35■□□□□ 0.37
Sptlc1O35704 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm24245-201ENSMUST00000157318 57 ntBASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm25911-201ENSMUST00000157621 56 ntBASIC17.35■□□□□ 0.37
Sptlc1O35704 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.35■□□□□ 0.37
Sptlc1O35704 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.35■□□□□ 0.37
Sptlc1O35704 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.35■□□□□ 0.37
Sptlc1O35704 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sptlc1O35704 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sptlc1O35704 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.34■□□□□ 0.37
Sptlc1O35704 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.34■□□□□ 0.37
Sptlc1O35704 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sptlc1O35704 Gm2756-201ENSMUST00000195851 400 ntBASIC17.34■□□□□ 0.37
Sptlc1O35704 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.34■□□□□ 0.37
Sptlc1O35704 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.34■□□□□ 0.37
Sptlc1O35704 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.34■□□□□ 0.37
Sptlc1O35704 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sptlc1O35704 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms