Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.24■□□□□ 0.35
Clk2O35491 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clk2O35491 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Clk2O35491 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.24■□□□□ 0.35
Clk2O35491 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.24■□□□□ 0.35
Clk2O35491 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.24■□□□□ 0.35
Clk2O35491 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.24■□□□□ 0.35
Clk2O35491 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.24■□□□□ 0.35
Clk2O35491 Gm19164-201ENSMUST00000210667 640 ntBASIC17.24■□□□□ 0.35
Clk2O35491 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clk2O35491 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.24■□□□□ 0.35
Clk2O35491 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clk2O35491 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clk2O35491 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Clk2O35491 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.23■□□□□ 0.35
Clk2O35491 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.23■□□□□ 0.35
Clk2O35491 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.23■□□□□ 0.35
Clk2O35491 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clk2O35491 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clk2O35491 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clk2O35491 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.22■□□□□ 0.35
Clk2O35491 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.22■□□□□ 0.35
Clk2O35491 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.22■□□□□ 0.35
Clk2O35491 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clk2O35491 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.22■□□□□ 0.35
Clk2O35491 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Clk2O35491 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.21■□□□□ 0.35
Clk2O35491 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.21■□□□□ 0.35
Clk2O35491 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.21■□□□□ 0.35
Clk2O35491 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Clk2O35491 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.21■□□□□ 0.35
Clk2O35491 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.21■□□□□ 0.35
Clk2O35491 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.21■□□□□ 0.35
Clk2O35491 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clk2O35491 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clk2O35491 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clk2O35491 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clk2O35491 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.2■□□□□ 0.34
Clk2O35491 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clk2O35491 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms