Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm17807-201ENSMUST00000186869 298 ntBASIC13.83□□□□□ -0.2
Atf6bO35451 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.83□□□□□ -0.2
Atf6bO35451 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.83□□□□□ -0.2
Atf6bO35451 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.83□□□□□ -0.2
Atf6bO35451 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Atf6bO35451 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.82□□□□□ -0.2
Atf6bO35451 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Atf6bO35451 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Atf6bO35451 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Atf6bO35451 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.82□□□□□ -0.2
Atf6bO35451 Mir3081-201ENSMUST00000175305 84 ntBASIC13.82□□□□□ -0.2
Atf6bO35451 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Atf6bO35451 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Atf6bO35451 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Atf6bO35451 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.81□□□□□ -0.2
Atf6bO35451 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Atf6bO35451 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Atf6bO35451 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Atf6bO35451 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.81□□□□□ -0.2
Atf6bO35451 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.81□□□□□ -0.2
Atf6bO35451 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.81□□□□□ -0.2
Atf6bO35451 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.81□□□□□ -0.2
Atf6bO35451 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Atf6bO35451 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Atf6bO35451 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Atf6bO35451 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6bO35451 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Atf6bO35451 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Atf6bO35451 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Atf6bO35451 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf6bO35451 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Atf6bO35451 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6bO35451 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms