Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11aO35305 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11aO35305 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.08■□□□□ 0.33
Tnfrsf11aO35305 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11aO35305 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11aO35305 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Tnfrsf11aO35305 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf11aO35305 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Birc2-201ENSMUST00000054878 378 ntBASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf11aO35305 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf11aO35305 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm4459-201ENSMUST00000118750 468 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm8825-201ENSMUST00000182565 998 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm4518-201ENSMUST00000182638 718 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.06■□□□□ 0.32
Tnfrsf11aO35305 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms