Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Gm7638-201ENSMUST00000121348 967 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Actl10-202ENSMUST00000226583 1501 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.45□□□□□ -0.42
Tnfsf11O35235 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfsf11O35235 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf11O35235 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.43□□□□□ -0.42
Tnfsf11O35235 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.43□□□□□ -0.42
Tnfsf11O35235 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf11O35235 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf11O35235 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.42□□□□□ -0.42
Tnfsf11O35235 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf11O35235 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms