Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Ebf3O08791 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.49■□□□□ 0.23
Ebf3O08791 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ebf3O08791 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.48■□□□□ 0.23
Ebf3O08791 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ebf3O08791 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Gm8097-201ENSMUST00000117903 829 ntBASIC16.48■□□□□ 0.23
Ebf3O08791 Gm4459-201ENSMUST00000118750 468 ntBASIC16.48■□□□□ 0.23
Ebf3O08791 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.48■□□□□ 0.23
Ebf3O08791 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Ebf3O08791 Gm5264-201ENSMUST00000190584 848 ntBASIC16.48■□□□□ 0.23
Ebf3O08791 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ebf3O08791 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ebf3O08791 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ebf3O08791 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ebf3O08791 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ebf3O08791 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.47■□□□□ 0.23
Ebf3O08791 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.47■□□□□ 0.23
Ebf3O08791 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
Ebf3O08791 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.47■□□□□ 0.23
Ebf3O08791 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.47■□□□□ 0.23
Ebf3O08791 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Ebf3O08791 Gm2213-201ENSMUST00000197485 688 ntBASIC16.47■□□□□ 0.23
Ebf3O08791 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.47■□□□□ 0.23
Ebf3O08791 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.47■□□□□ 0.23
Ebf3O08791 Psmb5-202ENSMUST00000227257 622 ntBASIC16.47■□□□□ 0.23
Ebf3O08791 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ebf3O08791 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ebf3O08791 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ebf3O08791 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ebf3O08791 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.46■□□□□ 0.23
Ebf3O08791 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ebf3O08791 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.46■□□□□ 0.23
Ebf3O08791 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ebf3O08791 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ebf3O08791 Gm12497-201ENSMUST00000138778 237 ntBASIC16.46■□□□□ 0.23
Ebf3O08791 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.46■□□□□ 0.23
Ebf3O08791 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.46■□□□□ 0.23
Ebf3O08791 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
Ebf3O08791 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.46■□□□□ 0.23
Ebf3O08791 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Ebf3O08791 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ebf3O08791 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ebf3O08791 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ebf3O08791 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ebf3O08791 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ebf3O08791 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ebf3O08791 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ebf3O08791 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.45■□□□□ 0.22
Ebf3O08791 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.45■□□□□ 0.22
Ebf3O08791 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.45■□□□□ 0.22
Ebf3O08791 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Ebf3O08791 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ebf3O08791 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ebf3O08791 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms