Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Top6blJ3QMY9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Gm13418-201ENSMUST00000119097 944 ntBASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Gm11780-201ENSMUST00000136880 516 ntBASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Top6blJ3QMY9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Gm7461-201ENSMUST00000058918 827 ntBASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Top6blJ3QMY9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Gm7862-201ENSMUST00000121461 292 ntBASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Top6blJ3QMY9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Gm25990-201ENSMUST00000102440 86 ntBASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Top6blJ3QMY9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Top6blJ3QMY9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.59■□□□□ 0.25
Top6blJ3QMY9 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms