Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx1-1G3UXB3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Mir8112-201ENSMUST00000184382 131 ntBASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Gm5779-201ENSMUST00000218467 910 ntBASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 AC118006.2-201ENSMUST00000224167 962 ntBASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx1-1G3UXB3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm15824-201ENSMUST00000119516 955 ntBASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm44855-201ENSMUST00000205725 362 ntBASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm45384-201ENSMUST00000210451 277 ntBASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm18622-201ENSMUST00000219361 595 ntBASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx1-1G3UXB3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm15171-201ENSMUST00000122191 334 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm25406-201ENSMUST00000157599 105 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm5177-201ENSMUST00000183092 997 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm37234-201ENSMUST00000193259 1441 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.19■□□□□ 0.5
Nkx1-1G3UXB3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx1-1G3UXB3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms