Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh9F8VPK8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdh9F8VPK8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh9F8VPK8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh9F8VPK8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Mir6404-201ENSMUST00000183699 94 ntBASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh9F8VPK8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh9F8VPK8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms