Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.04■□□□□ 0.64
Ube4aE9Q735 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.04■□□□□ 0.64
Ube4aE9Q735 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.04■□□□□ 0.64
Ube4aE9Q735 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.04■□□□□ 0.64
Ube4aE9Q735 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ube4aE9Q735 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.03■□□□□ 0.64
Ube4aE9Q735 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ube4aE9Q735 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.02■□□□□ 0.64
Ube4aE9Q735 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ube4aE9Q735 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ube4aE9Q735 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.01■□□□□ 0.63
Ube4aE9Q735 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.01■□□□□ 0.63
Ube4aE9Q735 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Gm13294-201ENSMUST00000121757 1330 ntBASIC19■□□□□ 0.63
Ube4aE9Q735 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ube4aE9Q735 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ube4aE9Q735 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ube4aE9Q735 Gm13597-201ENSMUST00000121239 375 ntBASIC19■□□□□ 0.63
Ube4aE9Q735 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ube4aE9Q735 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ube4aE9Q735 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ube4aE9Q735 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms