Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hfm1D3Z4R1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Gm12151-201ENSMUST00000121374 290 ntBASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Gm5866-201ENSMUST00000177881 973 ntBASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 H2-Pa-201ENSMUST00000182803 626 ntBASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hfm1D3Z4R1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Gm12017-201ENSMUST00000122453 1003 ntBASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Haglr-201ENSMUST00000100000 2085 ntBASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hfm1D3Z4R1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Gm11424-201ENSMUST00000121929 829 ntBASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Gm8839-201ENSMUST00000121279 1645 ntBASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
Hfm1D3Z4R1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Gm8318-201ENSMUST00000182954 872 ntBASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Hfm1D3Z4R1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Gm13216-201ENSMUST00000117145 591 ntBASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Gm27618-201ENSMUST00000183671 60 ntBASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Gm27306-201ENSMUST00000183970 107 ntBASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hfm1D3Z4R1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Gm10154-201ENSMUST00000084445 354 ntBASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hfm1D3Z4R1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Hfm1D3Z4R1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms