Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.2□□□□□ -0.14
Shank1D3YZU1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shank1D3YZU1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Gm4899-201ENSMUST00000178708 719 ntBASIC14.19□□□□□ -0.14
Shank1D3YZU1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.19□□□□□ -0.14
Shank1D3YZU1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.19□□□□□ -0.14
Shank1D3YZU1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shank1D3YZU1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.18□□□□□ -0.14
Shank1D3YZU1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.18□□□□□ -0.14
Shank1D3YZU1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shank1D3YZU1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.18□□□□□ -0.14
Shank1D3YZU1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Gm37153-201ENSMUST00000193637 231 ntBASIC14.17□□□□□ -0.14
Shank1D3YZU1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Shank1D3YZU1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms