Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Gm12428-201ENSMUST00000119844 727 ntBASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a6B1AVK5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Gm13223-201ENSMUST00000118609 747 ntBASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Gm22175-201ENSMUST00000175007 78 ntBASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col4a6B1AVK5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Gm10499-201ENSMUST00000174094 934 ntBASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.22■□□□□ 0.19
Col4a6B1AVK5 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col4a6B1AVK5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.21■□□□□ 0.19
Col4a6B1AVK5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Gm7774-201ENSMUST00000200064 533 ntBASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Gm10154-201ENSMUST00000084445 354 ntBASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col4a6B1AVK5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.21■□□□□ 0.18
Col4a6B1AVK5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a6B1AVK5 Gm14722-201ENSMUST00000118943 689 ntBASIC16.21■□□□□ 0.18
Col4a6B1AVK5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.21■□□□□ 0.18
Col4a6B1AVK5 Gm38294-201ENSMUST00000192831 381 ntBASIC16.21■□□□□ 0.18
Col4a6B1AVK5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a6B1AVK5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col4a6B1AVK5 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Gm15693-201ENSMUST00000120470 637 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms