Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.31■□□□□ 0.52
Chd5A2A8L1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Gm20553-201ENSMUST00000204205 844 ntBASIC18.31■□□□□ 0.52
Chd5A2A8L1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chd5A2A8L1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chd5A2A8L1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.29■□□□□ 0.52
Chd5A2A8L1 Mir1895-201ENSMUST00000122615 79 ntBASIC18.29■□□□□ 0.52
Chd5A2A8L1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.29■□□□□ 0.52
Chd5A2A8L1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.29■□□□□ 0.52
Chd5A2A8L1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.29■□□□□ 0.52
Chd5A2A8L1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.29■□□□□ 0.52
Chd5A2A8L1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Chd5A2A8L1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chd5A2A8L1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.28■□□□□ 0.52
Chd5A2A8L1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.28■□□□□ 0.52
Chd5A2A8L1 Gm8396-201ENSMUST00000057361 823 ntBASIC18.28■□□□□ 0.52
Chd5A2A8L1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.28■□□□□ 0.52
Chd5A2A8L1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Chd5A2A8L1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Mir6956-201ENSMUST00000183598 62 ntBASIC18.27■□□□□ 0.52
Chd5A2A8L1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.27■□□□□ 0.52
Chd5A2A8L1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Chd5A2A8L1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms