Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Gm18101-201ENSMUST00000215769 548 ntBASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc112A0AUP1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc112A0AUP1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc112A0AUP1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Gm6433-201ENSMUST00000118634 875 ntBASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc112A0AUP1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc112A0AUP1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccdc112A0AUP1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Gm18032-201ENSMUST00000222541 538 ntBASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.14■□□□□ 0.49
Ccdc112A0AUP1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms