Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rpl9-ps6A0A140T8T4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.27■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm2651-201ENSMUST00000203560 838 ntBASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm44771-201ENSMUST00000206975 626 ntBASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm19164-201ENSMUST00000210667 640 ntBASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm7222-201ENSMUST00000117512 906 ntBASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Mir5131-201ENSMUST00000175426 93 ntBASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rpl9-ps6A0A140T8T4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms