Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv29A0A0G2LB96 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trbv29A0A0G2LB96 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Gm22240-201ENSMUST00000175225 82 ntBASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trbv29A0A0G2LB96 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trbv29A0A0G2LB96 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Trbv29A0A0G2LB96 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trbv29A0A0G2LB96 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms