Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm4459-201ENSMUST00000118750 468 ntBASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm12644-201ENSMUST00000119935 606 ntBASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm34391-201ENSMUST00000203706 907 ntBASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.27■□□□□ 0.68
Atg4a-psA0A0G2JFS9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms