Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv30A0A0B4J1P1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm44454-201ENSMUST00000198541 138 ntBASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv30A0A0B4J1P1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm18669-201ENSMUST00000216049 778 ntBASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv30A0A0B4J1P1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.96□□□□□ -0.49
Trbv30A0A0B4J1P1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms