Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm13836-201ENSMUST00000121159 501 ntBASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm29707-201ENSMUST00000196325 491 ntBASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm715-201ENSMUST00000117865 831 ntBASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm11336-201ENSMUST00000118168 334 ntBASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sirpb1aA0A0A6YYP6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms