Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm18115-201ENSMUST00000221209 621 ntBASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Sybu-209ENSMUST00000228639 4113 ntBASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv3A0A0A6YYE2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv3A0A0A6YYE2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm27405-201ENSMUST00000184201 112 ntBASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trbv3A0A0A6YYE2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm38027-201ENSMUST00000192315 235 ntBASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms