Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 App-207ENSMUST00000227737 2827 ntBASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mir1668-201ENSMUST00000184114 107 ntBASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gm44450-201ENSMUST00000199528 114 ntBASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Sybu-209ENSMUST00000228639 4113 ntBASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.24□□□□□ -0.61
Ighv1-11A0A0A6YWI9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms