Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav21-dv12A0A075B6C4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav21-dv12A0A075B6C4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Prob1-201ENSMUST00000097619 3021 ntBASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav21-dv12A0A075B6C4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav21-dv12A0A075B6C4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms