Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav6-5A0A075B6B5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Gm7638-201ENSMUST00000121348 967 ntBASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.35□□□□□ -0.43
Trav6-5A0A075B6B5 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Gm13186-201ENSMUST00000118031 316 ntBASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-5A0A075B6B5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-5A0A075B6B5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-5A0A075B6B5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-5A0A075B6B5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Gm12896-201ENSMUST00000118430 226 ntBASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Gm18115-201ENSMUST00000221209 621 ntBASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-5A0A075B6B5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms